CDS

Accession Number TCMCG065C11533
gbkey CDS
Protein Id XP_004962407.1
Location join(25988880..25989872,25990904..25991113,25991223..25991483,25992076..25992162,25992506..25992604)
Gene LOC101773348
GeneID 101773348
Organism Setaria italica

Protein

Length 549aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004962350.4
Definition sorting nexin 2B [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category U
Description Vps5 C terminal like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17917        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000139        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005771        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0030904        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031902        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032585        [VIEW IN EMBL-EBI]
GO:0032588        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0035091        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045324        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046982        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051604        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGTCCTCAACGCCGCCGCCGGAGCCGGCGGCCGGCGACGACGACATGGAGTCCCTCCCCCTCGCCGCCGCCTCCGACTACGCATCCGTCGCCTCCACCTTCGACCCCCTCCTCTCCTCCGCCTCCGCCGCCTCGCCCCGCTCGCCCCGCTCCCCTCCGGCTCGCGCCGCCGCCTTCACGCTCTCCCCGACCTCCTCCTCCTCGTTCGTCGACCCGCCCTCCTACGCCGACGCCACCGGCGCCGGCGCCGGCTCCTCCTCCCCACGCTCCGCCTCCTCGCCCTCCTCCGCGTCGCCGAGATCCGCGCGCGCGGCGGCCTCCGAGTACTCCCTGCTCGCCGTCTCCGACCCGGAGACCGAGGCCGAGCCCGCCGCCACCTCGCTCGTCCCCGGATCCGCGCCCACCTACGTCTCCTACCTCGTCACCAGCGTCCGCCGCGGGGACCCCGCCCAGCGCCGCCACGCCGTGCGGCGCCGCTTCCGGGACTTCGTCACGCTCGCCGACCGCCTCGCCGAGGCCTTCCGGGGTCACTTCGTGCCGCCGCGGCCCGACAAGAACACCGTCGAGAGCCAGGTCATGCAGAAGGACGAGTTCGTGGCGCAGCGCCGCGCCGCGCTGGAACGATACCTGTGGCGGCTCGCCGAGCACCCCGCCATCGGGCCCAGCGACGAGCTGCGCGTCTTCCTGCAGACCGAGGGCAAGATGCCGCTTCCAGGCAGCACTGATGTTGCGTCGCGGATGCTCGATGGGGCGGCTAGGCTGCCGCGCCAGCTCATCGCTGGGGAGGAGGCCGTCGCTGCTCCGCAGGACGTCGTGCAGCCTGCCAAGGGCGGCAGGGACCTGCTCAGGATATTCAAAGAGCTCAAGCAGTCGGTGGTCACTGACTGGGGCGGCGTGAAGCCGCCACTGGTGGAGGAGGATAGGGACTTCCTGGAGAAGAAGGGGAAGCTGCAGGAGTGGGAGCAGCATCTCACCAGTGCGTCACAACAGGCAGAAGCACTCGTCAAGGCCCAACAAGATATGGGTGAAACAATGGGAGCGCTTGGACTGGCATTTGTTAGACTAACAAAGTTTGAGACTGAGGAGGCAATGTATGATTCGCAGAGGATAAGAGCAGCTGACAGCAGATGCGTAGCTACTGCAGCTGTTAAAGCTAGCAGGGCATGCCGAGATCTGAATGCTCAAACTGTTAAATATCTGGATACGCTGCATGAACATTTAAGCATAATGCTGTCTGTCCACACTGCATTGTCTGATCGGGCAAGTGCATTATTGACTGTACAAACACTTATGTCAGATTTGGCATCATTACAGTCAAGGATTGAGAAACTCGAAGCTGCATCCTCAAAGATATTTGGTGGTGATAGAGCTAGGATTCGCAGAGTCGAAGAGCTAAGGGAAACAATTAGGGCTACTGAAGATGCTAAGTTCTGTGCTTTAAGAGAGTATGAGAGAATCAAGGAAAATAACAGAAGTGAACTCCAGCGACTAGACACAGAAAGAAAAGAAGATTTTTTGGCGATGCTAAAAGGATTTGTTGCAAGCCAGGCAGCCTACGCGGAGAAAATTGTGGATGGTTGGCAGACTGTGGCTGAGGAGACCAGCGGATATGCGCGAGGATCTGATAATGCCATCTTAGGCTCCTAG
Protein:  
MMSSTPPPEPAAGDDDMESLPLAAASDYASVASTFDPLLSSASAASPRSPRSPPARAAAFTLSPTSSSSFVDPPSYADATGAGAGSSSPRSASSPSSASPRSARAAASEYSLLAVSDPETEAEPAATSLVPGSAPTYVSYLVTSVRRGDPAQRRHAVRRRFRDFVTLADRLAEAFRGHFVPPRPDKNTVESQVMQKDEFVAQRRAALERYLWRLAEHPAIGPSDELRVFLQTEGKMPLPGSTDVASRMLDGAARLPRQLIAGEEAVAAPQDVVQPAKGGRDLLRIFKELKQSVVTDWGGVKPPLVEEDRDFLEKKGKLQEWEQHLTSASQQAEALVKAQQDMGETMGALGLAFVRLTKFETEEAMYDSQRIRAADSRCVATAAVKASRACRDLNAQTVKYLDTLHEHLSIMLSVHTALSDRASALLTVQTLMSDLASLQSRIEKLEAASSKIFGGDRARIRRVEELRETIRATEDAKFCALREYERIKENNRSELQRLDTERKEDFLAMLKGFVASQAAYAEKIVDGWQTVAEETSGYARGSDNAILGS